06/17
- annealed linker oligos
- golden gate into RFP construct
06/18
- transformed golden gate product
06/19
- all linkers grew colonies except 9TCS6
- picked colonies for all except 9TCS6
- retransformed 9TCS6
06/23
- digest and gel verification
- 3TCS3, 3TCS9, 9TCSX show correct band pattern
06/24
sequencing - sequencing - internal BsaI cut site in Gal4VP16 caused failed golden gates -> SDM to mutate out internal cut site
07/14
07/15
- transformed golden gate reactions – no colonies
07/16
- replate transformations - no colonies
07/17
- redo golden gates with extra ligation step,
- transform reactions
07/19
- inoculate liquid cultures
07/20
- miniprep, digest, gel - all appear correct
07/21
07/23
- Correct linkers - innoculate midis:
- Ambiguous sequencing - repeat + innoculate minis:
- Failed linkers - innoculate minis, digest, gel, sequencing
- 3T3 - sequencing good > innoculate midi
- 3T15 - failed gel > mini
- 6T9 - sequencing not good > mini
- 9t15 - sequencing not good > mini
- 12t9 - sequencing not good > mini
- 12t12 - sequencing not good > mini
07/24
- Midis verified - all correct:
- Failed linkers - mini, digest, gel - all correct > sequencing:
- Correct sequencing
07/27
hEF1a:CD79A-XnTCSXc-Gal4VP16
midi verified |
| 6TCS6 | 9TCS6 | 12TCS6 | |
|
midi verified | |
3TCS9 | 6TCS9 | 9TCS9 | 12TCS9 | 15TCS9 |
| midi verified | plated 8/22 |
| 6TCS12 | 9TCS12 | 12TCS12 | |
|
midi verified | |
3TCS15 | | 9TCS15 | | 15TCS15 |
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