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TASKWhoDunnitObserved
Split cellsAG, CR, GB, JA, LA, SSAW
Seed platesAG, CR, GB, LA, SSAW
TransfectionAG, GB, LAAC, SS

...

FACS PrepAG, LACR
Imaging (FloCyto)BTAG, AW, CR, JX, LA

 

Practice Transfections:

Toggle Cloak
CONTROLS

...

Cloak

...

  1. +ve

...

  1. : single color transfection (eYFP, eBFP or mKate, as appropriate)
  2. +ve/+ve

...

  1. : tri-color control (

...

  1. eYFP, eBFP and mKate co-transfected: allows for comparison of color/intensity when imaging)
  2. -ve: perform protocol, excluding DNA, or with dummy DNA
  3. -ve/-ve: no actions performed on cells

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PRACTICE #1: Fluorescent protein under constitutive promoter

Cloak
11 complete 6/23: Seed cells 12 complete 6/24: Transfect hEF1a:eYFP (472 ng/uL) into HEK cells 13 complete 6/26 (4.30pm): Flow Cytometer
  • Determine optimal Lipofectamine LTX volume (24 well)
  • Determine transfection efficiency (quantitatively)

RESULT: Decent transfection efficiency (~60%). Move on to Practice #2.

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PRACTICE #2: Co-transfection (2 fluorescent proteins under constitutive promoter)

Cloak

...

ATTEMPT #1

36 complete 7/

...

3Seed cells23

...

complete 7/

...

4: Transfect hEF1a:eYFP (472 ng/uL) and hEF1a:

...

tagBFP (1176 ng/uL) into HEK cells24

...

complete 7/

...

6 (

...

1pm): Flow Cytometer

 

  • DNA Dilution: 10uL hEF1a:eYFP; 5uL hEF1a:tagBFP
  • (Y+B)x: add 1:1

...

  • (25uL hEF1a:eYFP/tagBFP-lipid complex)
Y1
    • hEF1a:eYFP

    ...

    (Y+

    ...

    B)1

      ...

      • hEF1a:eYFP
      • hEF1a:tagBFP

      ...

      ////// ////// ////// -ve control
      • dummy DNA
      • with Lipofectamine
      Y2

      ...

        ...

        • hEF1a:eYFP

        ...

        (Y+

        ...

        B)2

          ...

          • hEF1a:eYFP
          • hEF1a:tagBFP

          ...

          ////// ////// ////// -ve control
          • dummy DNA
          • with Lipofectamine

          ...

          B1

            ...

            • hEF1a:

            ...

            • tagBFP

            ...

            (Y+

            ...

            B)3

              ...

              • hEF1a:eYFP
              • hEF1a:tagBFP

              ...

              ////// ////// ////// -ve/-ve control
                • cells (no action)

                ...

                • _uL complete media
                • _uL hEF1a:mKate
                • _uL Lipofectamine LTX
                • no DNA
                • no Lipofectamine
                B2
                • hEF1a:tagBFP
                (Y+B)4
                • hEF1a:eYFP
                • hEF1a:tagBFP

                ...

                ////// ////// ////// -ve/-ve control

                ...

                • cells (no action)

                Toggle Cloak
                PRACTICE #3: Fluorescent protein under inducible promoter

                ...

                • no DNA
                • no Lipofectamine

                RESULT: Extremely low transfection efficiency (<10%). Repeat to improve co-transfection results.

                 

                ATTEMPT #2

                22 complete 7/9: Seed cells 37 complete 7/10: Transfect hEF1a:mKate (621 ng/uL) and hEF1a:eBFP (405 ng/uL) into HEK cells 38 complete 7/12 (1:30pm

                ...

                ): Flow Cytometer

                 

                ...

                • _uL complete media
                • _uL hEF1a:eYFP
                • _uL Lipofectamine LTX

                • DNA Dilution: 8.1uL (10 uL) hEF1a:mKate; 12.3uL (15 uL) hEF1a:eBFP
                • (R+B)x: add 1:1 (25uL hEF1a:mKate/eBFP-lipid complex)
                R1
                • hEF1a:mKate
                (R+B)1
                • hEF1a:mKate
                • hEF1a:eBFP

                ...

                //////////////////-ve control
                • dummy DNA

                ...

                • with Lipofectamine
                R2

                  ...

                  • hEF1a:

                  ...

                  • mKate
                  (

                  ...

                  R+

                  ...

                  B)2

                  ...

                    ...

                    • hEF1a:mKate

                    ...

                    • hEF1a:eBFP
                    //////////////////-ve control
                    • dummy DNA

                    ...

                    • with Lipofectamine
                    B1

                      ...

                      • hEF1a:

                      ...

                      • eBFP
                      (

                      ...

                      R+

                      ...

                      B)3

                      ...

                        ...

                        • hEF1a:mKate

                        ...

                        • hEF1a:eBFP
                        //////////////////-ve/-ve control
                        • no DNA

                        ...

                        • no

                        ...

                        • Lipofectamine

                        ...

                        B2

                        ...

                          ...

                          • hEF1a:

                          ...

                          • eBFP
                          (

                          ...

                          R+

                          ...

                          B)4

                          ...

                            ...

                            • hEF1a:mKate

                            ...

                            • hEF1a:eBFP
                            //////////////////-ve/-ve control

                              ...

                              • no DNA
                              • no Lipofectamine

                              RESULT: Efficiency ~20%

                               

                              Toggle Cloak
                              PRACTICE

                              ...

                              #3: Fluorescent protein under inducible promoter (DOX ladder)

                              Cloak

                              ...

                              14 complete 7/

                              ...

                              10Seed cells

                              ...

                              15 complete 7/

                              ...

                              11: Transfect

                              ...

                              TRE:mKate (431 ng/uL), hEF1a:rtTA (169 ng/uL) and hEF1a:eYFP (1045 ng/uL - transfection marker) into HEK cells 16 complete 7/12: Add DOX 18 complete 7/13 (1:30pm): Flow Cytometer

                               

                              ...

                              • DNA Dilution: 4.8uL hEF1a:eYFP

                              ...

                              • ; 29.6uL hEF1a:rtTA; 11.6uL TRE:mKate
                              • Conc. of DOX: 1mg/uL
                              • (D=x): add 2:1:2
                                1. 20uL hEF1a:eYFP-lipid complex
                                2. 10uL hEF1a:rtTA-lipid complex
                                3. 20uL TRE:mKate-lipid complex

                               

                              +ve control
                              • hEF1a:eYFP
                              +ve control
                              • hEF1a:eYFP
                              -ve control
                              • dummy DNA
                              • with Lipofectamine
                              -ve control
                              • dummy DNA
                              • with Lipofectamine
                              -ve/-ve control
                              • no DNA
                              • no Lipofectamine
                              -ve/-ve control
                              • no DNA
                              • no Lipofectamine
                              //////

                              ...

                              //////////////////

                              ...

                              -ve control

                              • dummy DNA

                              ...

                              • _uL complete media
                              • _uL hEF1a:eYFP
                              • _uL Lipofectamine LTX

                              ...

                              • _uL complete media
                              • _uL hEF1a:mKate
                              • _uL Lipofectamine LTX

                              ...

                              -ve control

                              • dummy DNA

                              ...

                              • _uL complete media
                              • _uL hEF1a:mKate
                              • _uL Lipofectamine LTX

                              ...

                              • _uL complete media
                              • _uL hEF1a:mKate
                              • _uL Lipofectamine LTX

                              ...

                              -ve/-ve control

                              • cells (no action)
                              ////////////
                              (D=0)1
                              • no DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              (D=0)2
                              • no DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=1
                              • 1mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=2(*3)
                              • 2mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=3(*5)
                              • 3mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=4(*10)
                              • 4mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=5(*2)
                              • 5mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=6(*4)
                              • 6mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=7(*6)
                              • 7mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=8(*7)
                              • 8mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=9(*8)
                              • 9mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate
                              D=10(*9)
                              • 10mg DOX
                              • hEF1a:eYFP
                              • hEF1a:rtTA
                              • TRE:mKate

                              RESULTS: Efficiency >50%


                              SUBGROUP-SPECIFIC PRACTICE EXPERIMENTS

                              Inducible and Constitutive Cascades

                              Image Added

                              ...

                              • _uL complete media
                              • _uL hEF1a:mKate
                              • _uL Lipofectamine LTX

                              ...

                              • _uL complete media
                              • _uL hEF1a:mKate
                              • _uL Lipofectamine LTX

                              ...

                              -ve/-ve control

                              ...