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However, when I tried to log into geojr.acesgrid.org it didn't let me, so I followed the directions from the above web page with login.acesgrid.org and with -X and that worked. I also had to run it without the '-nojvm' flag when calling matlab. Not 100% sure if this is right.
The non-interface version also works as below:
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You can also get qiime to work, using the qsub command above to get interactive computing and use:
module add qiime
I have yet to get it to workhaven't used it yet, but at least I loaded it.
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In summary, this cluster might be good for a few specific tasks, but it's not good for long term storage, and it's geared towards the earth science crowd and modeling ocean circulation etc. It might have some functional capabilities that you could use (i.e. Matlab, QIIME), but be careful not to leave data on their scratch because it will be deleted.