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changes.mady.by.user Filippo Menolascina

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Filippo

Species

Strain

E.coli (background K12) --> BL1

 

HCB33 (TSS496): E. coli wild type

HCB1584: E. coli D(tar)

HCB268: E. coli tsr::Tn5-1a

TSS945: E. coli D(tsr)

UU1250: D(tar tap) (tsr::Kan) D(trg) D(aer)

UU2162: D(tar tap) D(tsr) D(trg) D(aer)

 

TSS584: HCB33 / pVS129 (ecfp on pTrc99A)

TSS585: HCB33 / pVS132 (eyfp on pTrc99A)

TSS586: HCB33 / mCherry on pTrc99A

 

 

E. coli (background DH5a) --> BL1

 

 

TSS379

TSS342

TSS270

TSS712

TSS711

TSS943

TSS694

HCB1666

 

 

Salmonella (background Salmonella 14028) --> BL2

 

 

MB211 (TSS871): Salmonella 14028 Δtsr Δtar Δtrg Δaer ΔmcpB ΔmcpC Δtcp ΔmcpA Δtip

 

 

Salmonella (background LT2) --> BL2 (attenuated)

 

 

LT2 (TSS495): Salmonella LT2 wild type

LT2 (TSS497): Salmonella LT2wild type pSLT cured

TSS511: Salmonella LT2 D(cheV)

TSS642 (TH9972): Salmonella LT2 aer-6508::MudJ

TSS505: Salmonella LT2 D(cheY cheZ) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS516: Salmonella LT2 D(cheY cheZ) D(cheV) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS869 Salmonella LT2 D(cheY cheZ) D(tsr) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS879 Salmonella LT2 D(cheY cheZ) D(tar) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS891: Salmonella LT2 D(cheY cheZ) D(tar) D(tsr) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS953: Salmonella LT2 D(cheY cheZ) D(mcpB) D(mcpC) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS954: Salmonella LT2 D(cheY cheZ) D(tar) /pVS88 (cheY-yfp cheZ-cfp) / pML18 (tarSt)

TSS880: Salmonella LT2 D(cheY cheZ) D(tar) /pVS88 (cheY-yfp cheZ-cfp) / pVS123 (tarEc)
LT2 RecA: strain with the recA gene inactivated. kanamycin resistance is inserted in the mutated site.
LT2 recAo: strain with the SOS box mutated. Chloramphenicol resistance is inserted in the mutated site.
LT2 LexA(Ind-): strain with the lexA gene mutated. Chloramphenicol resistance is inserted in the mutated site.
LT2 CheY: strain with the cheY gene inactivated. Chloramphenicol resistance is inserted in the mutated site.
LT2 CheB: strain with the cheB gene inactivated. Chloramphenicol resistance is inserted in the mutated site.

TSS587: TSS497 / pVS129 (ecfp on pTrc99A)

TSS588: TSS497 / pVS132 (eyfp on pTrc99A)

TSS589: TSS497 / mCherry on pTrc99A


 

Melissa

 

 

Name

Strain

 

 

Vibrio coralliilyticus

BAA-450 (from ATCC)

 

 

 

 

 

 

 

 

...

 

 

Box 01

Strain

B

1

Vibrio sp.

12B9 GFP

B

2

Vibrio sp.

12B9RFP

B

3

Vibrio cycrotrophicus

1F53 GFP

B

4

Vibrio cycrotrophicus

1F53 RFP

B

5

Vibrio cycrotrophicus

1F111 GFP

B

6

Vibrio cycrotrophicus

1F111 RFP

B

7

Vibrio cycrotrophicus

ZF270 GFP

B

8

Vibrio cycrotrophicus

ZF270 RFP

B

9

 

 

C

1

Vibrio crassostreae

13D11 GFP

C

2

Vibrio crassostreae

13D11 RFP

C

3

Vibrio sp.

ZF223 GFP

C

4

Vibrio sp.

ZF223 RFP

C

5

Vibrio cycrotrophicus

FF274 RFP

C

6

 

 

C

7

 

 

C

8

 

 

C

9

 

 

D

1

Vibrio cycrotrophicus

ZF65

D

2

Vibrio cycrotrophicus

ZF270

D

3

Vibrio ordalii

FS144

D

4

Vibrio ordalii

FF93

D

5

Vibrio ordalii

1S257

D

6

Vibrio ordalii

12B9

D

7

(Vibrio cycrotrophicus)

(1F273)

D

8

(Vibrio cycrotrophicus)

(1F175)

D

9

Vibrio cycrotrophicus

1F111

E

1

Vibrio cycrotrophicus

ZF14

E

2

(Vibrio cycrotrophicus)

(1F289)

E

3

(Vibrio cycrotrophicus)

(1F289)

E

4

V. alginolyticus

YM4

E

5

Vibrio cycrotrophicus

ZF30

E

6

Vibrio cycrotrophicus

ZF99

E

7

Vibrio cycrotrophicus

ZF205

E

8

Vibrio cycrotrophicus

ZF28

E

9

Vibrio cycrotrophicus

FF160

F

1

Vibrio cycrotrophicus

1F53

F

2

Vibrio cycrotrophicus

1F97

F

3

Vibrio cycrotrophicus

FF160

F

4

 

 

F

5

 

 

F

6

 

 

F

7

 

 

F

8

 

 

F

9

 

 

F

 

 

 

E.coli (background K12) --> BL1

HCB33 (TSS496): E. coli wild type

HCB1584: E. coli D(tar)

HCB268: E. coli tsr::Tn5-1a

TSS945: E. coli D(tsr)

UU1250: D(tar tap) (tsr::Kan) D(trg) D(aer)

UU2162: D(tar tap) D(tsr) D(trg) D(aer)

 

TSS584: HCB33 / pVS129 (ecfp on pTrc99A)

TSS585: HCB33 / pVS132 (eyfp on pTrc99A)

TSS586: HCB33 / mCherry on pTrc99A

 

E. coli (background DH5a) --> BL1

TSS379

TSS342

TSS270

TSS712

TSS711

TSS943

TSS694

HCB1666

 

E. coli (natural isolates) --> BL2

ECOR2

ECOR12

ECOR13

ECOR18

ECOR19

ECOR21

ECOR27

ECOR29

ECOR31

ECOR32

ECOR33

ECOR37

ECOR45

ECOR48

ECOR50

ECOR51

ECOR62

ECOR68

 

Salmonella (background LT2) --> BL2 (attenuated)

LT2 (TSS495): Salmonella LT2 wild type

LT2 (TSS497): Salmonella LT2wild type pSLT cured

TSS511: Salmonella LT2 D(cheV)

TSS642 (TH9972): Salmonella LT2 aer-6508::MudJ

TSS505: Salmonella LT2 D(cheY cheZ) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS516: Salmonella LT2 D(cheY cheZ) D(cheV) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS869 Salmonella LT2 D(cheY cheZ) D(tsr) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS879 Salmonella LT2 D(cheY cheZ) D(tar) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS891: Salmonella LT2 D(cheY cheZ) D(tar) D(tsr) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS953: Salmonella LT2 D(cheY cheZ) D(mcpB) D(mcpC) / pVS88 (cheY-yfp cheZ-cfp) / pBAD33

TSS954: Salmonella LT2 D(cheY cheZ) D(tar) /pVS88 (cheY-yfp cheZ-cfp) / pML18 (tarSt)

TSS880: Salmonella LT2 D(cheY cheZ) D(tar) /pVS88 (cheY-yfp cheZ-cfp) / pVS123 (tarEc)

 

TSS587: TSS497 / pVS129 (ecfp on pTrc99A)

TSS588: TSS497 / pVS132 (eyfp on pTrc99A)

TSS589: TSS497 / mCherry on pTrc99A

 

Salmonella (background Salmonella 14028) --> BL2

MB211 (TSS871): Salmonella 14028 Δtsr Δtar Δtrg Δaer ΔmcpB ΔmcpC Δtcp ΔmcpA Δtip